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Plot options



Use multiple genes

Use list of genes Use mean expression of selected genes
Use ratio of two genes Filter by median expression
more genes param


Example input for multiple genes:
1007_s_at 1
200000_s_at -1
31637_s_at 0.5
40016_g_at -2

first: normal,
second: gene is inverted,
third: gene has weight,
fourth: gene has weight and is inverted

You can also use following format:
1007_s_at, 1
200000_s_at, -1
31637_s_at, 0.5
40016_g_at, -2

Split patients by
Auto select best cutoff INFO
Trichotomization :  INFO

Probe set options

user selected probe set
all probe sets per gene INFO
only JetSet best probe set INFO
Plot beeswarm graph of probe distribution: INFO

Restrict analysis to subtypes...

TP53 mutation:
Average CA125 below lower quartile: INFO

Restrict analysis to treatment groups...


Use following dataset(s) for the analysis:

(GSE14764: )

Array quality control: INFO

Please note: the generated p value does not include correction for multiple hypothesis testing by default.

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Please kindly cite following paper to support further development: Gyorffy B: Discovery and ranking of the most robust prognostic biomarkers in serous ovarian cancer, Geroscience, 2023, doi: 10.1007/s11357-023-00742-4. Copyright © 2009-2024 | Contact | Sitemap